CDS

Accession Number TCMCG006C116761
gbkey CDS
Protein Id XP_013647365.1
Location complement(join(41045624..41045890,41045980..41046120,41046211..41047116))
Gene LOC106352251
GeneID 106352251
Organism Brassica napus

Protein

Length 437aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013791911.2
Definition F-box/FBD/LRR-repeat protein At1g80470-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category J
Description Required for the assembly and or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits
KEGG_TC -
KEGG_Module M00177        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE br01610        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03011        [VIEW IN KEGG]
KEGG_ko ko:K02998        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03010        [VIEW IN KEGG]
map03010        [VIEW IN KEGG]
GOs GO:0000028        [VIEW IN EMBL-EBI]
GO:0000447        [VIEW IN EMBL-EBI]
GO:0000460        [VIEW IN EMBL-EBI]
GO:0000461        [VIEW IN EMBL-EBI]
GO:0000462        [VIEW IN EMBL-EBI]
GO:0000466        [VIEW IN EMBL-EBI]
GO:0000469        [VIEW IN EMBL-EBI]
GO:0000478        [VIEW IN EMBL-EBI]
GO:0000479        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003735        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006407        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030686        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031125        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042255        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0043628        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0051029        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071428        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0097064        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGATTCACAGGAGGACAAGTACATCTGAAGATAGGATAAGCAGTTTACCCAATACATTGTTATGTCAGATTCTATCGTACCTCTCTACGGAAGATTCGGTTCGGACCAGCGCTTTGTCTAAACGGTGGACCCATCTCTGGTTGCATGTTCCTGCTTTGGAGTTGGACTCCAGTAATTTTCCTGATGATTTCGAATTTGGGGATTTTTTCGATAACTTCCTGGAGTCTGGCGAAGAAGACATAAAGAGATTTGATTTGGTCTACAATGTTGAGGAGCACATTCATGAAGATTTTGTGACGAGGATTGATGATGTGGTTAATCGTGGAGTTTGTCATCTAACTATTCTCAACGAGTTGGATGTTGAAGAAGAGTTAGTTAGGATGCCTCTCTCTCTCTATTCATGCAGGACATTGGTGAGTTTAAATCTATACTGTGTAGTTTTCGATGCTCCCCGGGCAGCGTTGGTTTCTTTACCTCGTCTCAAGACTATGCATTTAGAGGCAGTTAAATTTGACGGAATGTGGATTCTTGGGGGTTTCATTTCAAGATGTTCGGTTCTTGAAGAGTTAACCATAGTCACGGATGATGGTGATGAACTCGGAGTTGTAATTGTGAGCTCGAAGTCGCTAAAAAGCTTCAAATTAAAATCTATGCGTAGTGAGGAAGCTGAAGACGAAGGTGATCCTACTGTTGTGATTGATGCTCCAAGACTTGAGTTTATGAGTATCACTGATTACCAATCTAAAAGGTTGGTAATTGACAATATTGGTCCCTTTGCAAAGGTGGACATTGATTTTATCTTTAAAGTGGAGGATGATGATTCATTTGGAGCTATGATCATTGATTTTCTGACCAAGTTATCCACAGTCCGTGAAATGATCATCTCTTCCAGAACGCTAGAGATGATCCATGATAACTGCGAATGGGAACTGCTACCTCAATTTGCTAATATGTCTCACTTGCATGCTTCGTTCCTTGAAACATCGTGGAACCTGTTGCTAACTTTTCTTGGCTGCTGTCCAAATCTACAGTCACTTGACTTGGAATTTGACTCTTTTCCAGAGCCAGAAGAGATTGAACTTTCATTTGTGCCGCAATGTTTCCAATCATCTCTCCAGTTTGTTGGACTGAGGACACCAATCAGGGTCGAAGGAACATTAAGTGAGATGAAACTACCAATGCTCTTTTTAAGGAATTGCAAAGTCCTGAAAAAACTGATGCTTAATGAGAGTTTCAGAAACGTCATCCAGAAAGTTAGAGGGATTCCGAAAATCTCGCCCCAGTTTCAAACTGTGGCTCTTTCAAATTAA
Protein:  
MSIHRRTSTSEDRISSLPNTLLCQILSYLSTEDSVRTSALSKRWTHLWLHVPALELDSSNFPDDFEFGDFFDNFLESGEEDIKRFDLVYNVEEHIHEDFVTRIDDVVNRGVCHLTILNELDVEEELVRMPLSLYSCRTLVSLNLYCVVFDAPRAALVSLPRLKTMHLEAVKFDGMWILGGFISRCSVLEELTIVTDDGDELGVVIVSSKSLKSFKLKSMRSEEAEDEGDPTVVIDAPRLEFMSITDYQSKRLVIDNIGPFAKVDIDFIFKVEDDDSFGAMIIDFLTKLSTVREMIISSRTLEMIHDNCEWELLPQFANMSHLHASFLETSWNLLLTFLGCCPNLQSLDLEFDSFPEPEEIELSFVPQCFQSSLQFVGLRTPIRVEGTLSEMKLPMLFLRNCKVLKKLMLNESFRNVIQKVRGIPKISPQFQTVALSN